Out newest method for interpreting SNVs called SEMpl is published in Bioinformatics! SEMpl uses in vivo transcription factor binding and chromatin accessibility data to predict how every possible nucleotide change within a binding motif will alter binding affinity. The resulting SNP effect matrices help prioritize noncoding variants that may disrupt gene regulation and contribute to disease. Congratulations to Sierra on leading this work!
Papers
Our manuscript on our method to characterize SNP Effects is published in Bioinformatics!
Research output
Related publication
Nishizaki SS
,
Ng N
,
Dong S
,
Porter RS
,
Morterud C
,
Williams C
,
Asman C
,
Switzenberg JA
,
Boyle AP
Bioinformatics
2019
50:2434
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